Diffusion Imaging Tractography


TrackVis Deterministic Tractography Tutorial

A walk-through of the virtual dissection of a white matter tract (left corticospinal tract) in the human brain using DTI data and the TrackVis software.

DTI Tractography

Here we show all of the deterministic tractography fibers that pass through a coronal slice plane filter.


<bibtex> @article{wakana_reproducibility_2007,

title = {Reproducibility of quantitative tractography methods applied to cerebral white matter},
volume = {36},
url = {http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WNP-4N9DK04-1&_user=4423&_coverDate=07%252F01%252F2007&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000059605&_version=1&_urlVersion=0&_userid=4423&md5=ff9555710d74f00580e4697744608887},
doi = {10.1016/j.neuroimage.2007.02.049},
number = {3},
journal = {Neuroimage},
author = {Setsu Wakana and Arvind Caprihan and Martina M Panzenboeck and James H Fallon and Michele Perry and Randy L Gollub and Kegang Hua and Jiangyang Zhang and Hangyi Jiang and Prachi Dubey and Ari Blitz and Peter van Zijl and Susumu Mori},
month = jul,
year = {2007},
pages = {630-44}



title = {Three-dimensional tracking of axonal projections in the brain by magnetic resonance imaging},
volume = {45},
number = {2},
journal = {Annals of Neurology},
author = {S. Mori and B J Crain and V P Chacko and P C van Zijl},
month = feb,
year = {1999},
keywords = {Animals, Axons, Brain, Magnetic Resonance Imaging, Rats},
pages = {265-9}



title = {Looking into the functional architecture of the brain with diffusion MRI},
volume = {4},
url = {http://www.nature.com/nrn/journal/v4/n6/abs/nrn1119.html},
doi = {10.1038/nrn1119},
number = {6},
journal = {Nature Reviews. Neuroscience},
author = {Denis Le Bihan},
month = jun,
year = {2003},
keywords = {Brain, Diffusion Magnetic Resonance Imaging, Humans, Image Processing: {Computer-Assisted}},
pages = {469-80}

} </bibtex>

neuroimaging/tractography.txt · Last modified: 2011/02/11 11:08 am PST by John Colby
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